Pty-chi
Contents:
Getting Started
Using Pty-chi
API Reference
Pty-chi
Index
Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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J
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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X
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Y
A
AD_GENERAL (ptychi.api.enums.Reconstructors attribute)
AD_PTYCHO (ptychi.api.enums.Reconstructors attribute)
ADADELTA (ptychi.api.enums.Optimizers attribute)
ADAGRAD (ptychi.api.enums.Optimizers attribute)
ADAM (ptychi.api.enums.Optimizers attribute)
ADAMAX (ptychi.api.enums.Optimizers attribute)
ADAMW (ptychi.api.enums.Optimizers attribute)
add_additional_opr_probe_modes_to_probe() (in module ptychi.utils)
affine_transform_constraint (ptychi.api.options.base.ProbePositionOptions attribute)
AffineDegreesOfFreedom (class in ptychi.api.enums)
alpha (ptychi.api.options.base.ObjectSmoothnessConstraintOptions attribute)
(ptychi.api.options.pie.PIEObjectOptions attribute)
(ptychi.api.options.pie.PIEProbeOptions attribute)
amplitude_clamp_limit (ptychi.api.options.dm.DMObjectOptions attribute)
apply_constraint (ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
ASGD (ptychi.api.enums.Optimizers attribute)
ASYMMETRY (ptychi.api.enums.AffineDegreesOfFreedom attribute)
auto_transfer_to_device() (in module ptychi.utils)
AutodiffPtychographyObjectOptions (class in ptychi.api.options.ad_ptychography)
AutodiffPtychographyOPRModeWeightsOptions (class in ptychi.api.options.ad_ptychography)
AutodiffPtychographyOptions (class in ptychi.api.options.ad_ptychography)
AutodiffPtychographyProbeOptions (class in ptychi.api.options.ad_ptychography)
AutodiffPtychographyProbePositionOptions (class in ptychi.api.options.ad_ptychography)
AutodiffPtychographyReconstructorOptions (class in ptychi.api.options.ad_ptychography)
AUTOENCODER (ptychi.api.enums.DIPModels attribute)
B
base (ptychi.api.enums.ForwardModels attribute)
(ptychi.api.enums.Reconstructors attribute)
BatchingModes (class in ptychi.api.enums)
BH (ptychi.api.enums.Reconstructors attribute)
BILINEAR (ptychi.api.enums.PatchInterpolationMethods attribute)
BOTH (ptychi.api.enums.MagPhaseComponents attribute)
build() (ptychi.api.task.PtychographyTask method)
build_data() (ptychi.api.task.PtychographyTask method)
build_default_device() (ptychi.api.task.PtychographyTask method)
build_default_dtype() (ptychi.api.task.PtychographyTask method)
build_logger() (ptychi.api.task.PtychographyTask method)
build_object() (ptychi.api.task.PtychographyTask method)
build_opr_mode_weights() (ptychi.api.task.PtychographyTask method)
build_preconditioner_with_all_modes (ptychi.api.options.base.ObjectOptions attribute)
build_probe() (ptychi.api.task.PtychographyTask method)
build_probe_positions() (ptychi.api.task.PtychographyTask method)
build_random_seed() (ptychi.api.task.PtychographyTask method)
build_reconstructor() (ptychi.api.task.PtychographyTask method)
C
calculate_data_size_gb() (in module ptychi.utils)
center_constraint (ptychi.api.options.base.ProbeOptions attribute)
center_modes_individually (ptychi.api.options.base.ProbeCenterConstraintOptions attribute)
check() (ptychi.api.options.base.ObjectOptions method)
(ptychi.api.options.base.OPRModeWeightsOptions method)
(ptychi.api.options.base.Options method)
(ptychi.api.options.base.PositionAffineTransformConstraintOptions method)
(ptychi.api.options.base.ProbeCenterConstraintOptions method)
(ptychi.api.options.base.ProbeOptions method)
(ptychi.api.options.base.ProbePositionOptions method)
(ptychi.api.options.base.SliceSpacingOptions method)
(ptychi.api.options.lsqml.LSQMLProbePositionOptions method)
(ptychi.api.options.lsqml.LSQMLReconstructorOptions method)
check_options() (ptychi.api.task.PtychographyTask method)
chunk_length (ptychi.api.options.dm.DMReconstructorOptions attribute)
chunked_processing() (in module ptychi.utils)
clear_memory() (in module ptychi.utils)
clip_update_magnitude_by_mad (ptychi.api.options.base.PositionCorrectionOptions attribute)
COMPACT (ptychi.api.enums.BatchingModes attribute)
component (ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
constrain_position_mean (ptychi.api.options.base.ProbePositionOptions attribute)
copy_data_from_task() (ptychi.api.task.PtychographyTask method)
correction_options (ptychi.api.options.base.ProbePositionOptions attribute)
correction_type (ptychi.api.options.base.PositionCorrectionOptions attribute)
CPU (ptychi.api.enums.Devices attribute)
CROSS_CORRELATION (ptychi.api.enums.PositionCorrectionTypes attribute)
cross_correlation_probe_threshold (ptychi.api.options.base.PositionCorrectionOptions attribute)
cross_correlation_real_space_width (ptychi.api.options.base.PositionCorrectionOptions attribute)
cross_correlation_scale (ptychi.api.options.base.PositionCorrectionOptions attribute)
D
d_mat (ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
d_mat_conj_transpose (ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
d_mat_pinv (ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
data (ptychi.api.options.data.PtychographyDataOptions attribute)
DECONVOLUTION (ptychi.api.enums.ImageIntegrationMethods attribute)
degrees_of_freedom (ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
detector_pixel_size_m (ptychi.api.options.data.PtychographyDataOptions attribute)
determine_position_origin_coords_by (ptychi.api.options.base.ObjectOptions attribute)
Devices (class in ptychi.api.enums)
differentiation_method (ptychi.api.options.base.PositionCorrectionOptions attribute)
diffraction_pattern_blur_sigma (ptychi.api.options.base.ForwardModelOptions attribute)
DIPModels (class in ptychi.api.enums)
direction (ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
Directions (class in ptychi.api.enums)
DISCRETE (ptychi.api.enums.ImageIntegrationMethods attribute)
DM (ptychi.api.enums.Reconstructors attribute)
DMObjectOptions (class in ptychi.api.options.dm)
DMOPRModeWeightsOptions (class in ptychi.api.options.dm)
DMOptions (class in ptychi.api.options.dm)
DMProbeOptions (class in ptychi.api.options.dm)
DMProbePositionOptions (class in ptychi.api.options.dm)
DMReconstructorOptions (class in ptychi.api.options.dm)
Dtypes (class in ptychi.api.enums)
E
eigenmode_update_relaxation (ptychi.api.options.base.ProbeOptions attribute)
ELLIPSE (ptychi.api.enums.ProbeSupportMethods attribute)
enabled (ptychi.api.options.base.FeatureOptions attribute)
(ptychi.api.options.base.ObjectL1NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectL2NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
(ptychi.api.options.base.ObjectSmoothnessConstraintOptions attribute)
(ptychi.api.options.base.ObjectTotalVariationOptions attribute)
(ptychi.api.options.base.OPRModeWeightsSmoothingOptions attribute)
(ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
(ptychi.api.options.base.ProbeCenterConstraintOptions attribute)
(ptychi.api.options.base.ProbeOrthogonalizeIncoherentModesOptions attribute)
(ptychi.api.options.base.ProbeOrthogonalizeOPRModesOptions attribute)
(ptychi.api.options.base.ProbePowerConstraintOptions attribute)
(ptychi.api.options.base.ProbeSupportConstraintOptions attribute)
(ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
(ptychi.api.options.base.RemoveObjectProbeAmbiguityOptions attribute)
(ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
EPIE (ptychi.api.enums.Reconstructors attribute)
exit_wave_update_relaxation (ptychi.api.options.dm.DMReconstructorOptions attribute)
experimental (ptychi.api.options.ad_ptychography.AutodiffPtychographyObjectOptions attribute)
(ptychi.api.options.ad_ptychography.AutodiffPtychographyProbeOptions attribute)
(ptychi.api.options.pie.PIEProbeOptions attribute)
F
FeatureOptions (class in ptychi.api.options.base)
fft_shift (ptychi.api.options.data.PtychographyDataOptions attribute)
fixed_probe_support (ptychi.api.options.base.ProbeSupportConstraintOptions attribute)
fixed_probe_support_params (ptychi.api.options.base.ProbeSupportConstraintOptions attribute)
FLOAT16 (ptychi.api.enums.Dtypes attribute)
FLOAT32 (ptychi.api.enums.Dtypes attribute)
FLOAT64 (ptychi.api.enums.Dtypes attribute)
forward_model_class (ptychi.api.options.ad_ptychography.AutodiffPtychographyReconstructorOptions attribute)
ForwardModelOptions (class in ptychi.api.options.base)
ForwardModels (class in ptychi.api.enums)
FOURIER (ptychi.api.enums.ImageIntegrationMethods attribute)
(ptychi.api.enums.PatchInterpolationMethods attribute)
FOURIER_DIFFERENTIATION (ptychi.api.enums.ImageGradientMethods attribute)
FOURIER_SHIFT (ptychi.api.enums.ImageGradientMethods attribute)
free_space_propagation_distance_m (ptychi.api.options.data.PtychographyDataOptions attribute)
G
GAUSSIAN (ptychi.api.enums.ImageGradientMethods attribute)
(ptychi.api.enums.NoiseModels attribute)
gaussian_noise_std (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
generate_gaussian_random_image() (in module ptychi.utils)
generate_initial_object() (in module ptychi.utils)
generate_initial_opr_mode_weights() (in module ptychi.utils)
generate_secondary_probe_modes_hermite() (in module ptychi.utils)
get_data() (ptychi.api.task.PtychographyTask method)
get_data_to_cpu() (ptychi.api.task.PtychographyTask method)
get_default_complex_dtype() (in module ptychi.utils)
get_dict() (ptychi.api.options.base.Options method)
get_field_type() (ptychi.api.options.base.Options method)
get_max_batch_size() (in module ptychi.utils)
get_non_data_fields() (ptychi.api.options.base.ObjectOptions method)
(ptychi.api.options.base.OPRModeWeightsOptions method)
(ptychi.api.options.base.Options method)
(ptychi.api.options.base.ProbeOptions method)
(ptychi.api.options.base.ProbePositionOptions method)
(ptychi.api.options.data.PtychographyDataOptions method)
get_options_as_dict() (ptychi.api.task.PtychographyTask method)
get_probe_positions_x() (ptychi.api.task.PtychographyTask method)
get_probe_positions_y() (ptychi.api.task.PtychographyTask method)
get_probe_renormalization_factor() (in module ptychi.utils)
get_reconstructor_type() (ptychi.api.options.ad_ptychography.AutodiffPtychographyReconstructorOptions method)
(ptychi.api.options.dm.DMReconstructorOptions method)
(ptychi.api.options.lsqml.LSQMLReconstructorOptions method)
(ptychi.api.options.pie.PIEReconstructorOptions method)
get_suggested_object_size() (in module ptychi.utils)
GPU (ptychi.api.enums.Devices attribute)
GRADIENT (ptychi.api.enums.PositionCorrectionTypes attribute)
GS (ptychi.api.enums.OrthogonalizationMethods attribute)
H
hard_limits_magnitude_phase (ptychi.api.options.base.ObjectOptions attribute)
I
ImageGradientMethods (class in ptychi.api.enums)
ImageIntegrationMethods (class in ptychi.api.enums)
inertia (ptychi.api.options.dm.DMObjectOptions attribute)
(ptychi.api.options.dm.DMProbeOptions attribute)
initial_guess (ptychi.api.options.base.ObjectOptions attribute)
(ptychi.api.options.base.ProbeOptions attribute)
initial_weights (ptychi.api.options.base.OPRModeWeightsOptions attribute)
is_enabled_on_this_epoch() (ptychi.api.options.base.FeatureOptions method)
is_position_weight_update_enabled_on_this_epoch() (ptychi.api.options.base.PositionAffineTransformConstraintOptions method)
J
jsonize() (in module ptychi.utils)
L
l1_norm_constraint (ptychi.api.options.base.ObjectOptions attribute)
l2_norm_constraint (ptychi.api.options.base.ObjectOptions attribute)
LBFGS (ptychi.api.enums.Optimizers attribute)
load_from_dict() (ptychi.api.options.base.Options method)
load_options_from_dict() (ptychi.api.task.PtychographyTask method)
LossFunctions (class in ptychi.api.enums)
low_memory_mode (ptychi.api.options.base.ForwardModelOptions attribute)
LSQML (ptychi.api.enums.Reconstructors attribute)
LSQMLObjectOptions (class in ptychi.api.options.lsqml)
LSQMLOPRModeWeightsOptions (class in ptychi.api.options.lsqml)
LSQMLOptions (class in ptychi.api.options.lsqml)
LSQMLProbeOptions (class in ptychi.api.options.lsqml)
LSQMLProbePositionOptions (class in ptychi.api.options.lsqml)
LSQMLReconstructorOptions (class in ptychi.api.options.lsqml)
M
MAGNITUDE (ptychi.api.enums.MagPhaseComponents attribute)
MagPhaseComponents (class in ptychi.api.enums)
max_expected_error (ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
MEDIAN (ptychi.api.enums.OPRWeightSmoothingMethods attribute)
method (ptychi.api.options.base.OPRModeWeightsSmoothingOptions attribute)
(ptychi.api.options.base.ProbeOrthogonalizeIncoherentModesOptions attribute)
module
ptychi.api.enums
ptychi.utils
momentum_acceleration_gain (ptychi.api.options.lsqml.LSQMLProbePositionOptions attribute)
(ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
momentum_acceleration_gradient_mixing_factor (ptychi.api.options.lsqml.LSQMLProbePositionOptions attribute)
(ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
momentum_acceleration_memory (ptychi.api.options.lsqml.LSQMLProbePositionOptions attribute)
move_nested_tensors_to_device() (in module ptychi.utils)
MSE (ptychi.api.enums.LossFunctions attribute)
MSE_SQRT (ptychi.api.enums.LossFunctions attribute)
multimodal_update (ptychi.api.options.lsqml.LSQMLObjectOptions attribute)
multislice_regularization (ptychi.api.options.base.ObjectOptions attribute)
multislice_solve_obj_prb_step_size_jointly (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
N
NEAREST (ptychi.api.enums.ImageGradientMethods attribute)
(ptychi.api.enums.PatchInterpolationMethods attribute)
noise_model (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
NoiseModels (class in ptychi.api.enums)
NONE (ptychi.api.enums.ProbeSupportMethods attribute)
O
object_options (ptychi.api.options.ad_ptychography.AutodiffPtychographyOptions attribute)
(ptychi.api.options.dm.DMOptions attribute)
(ptychi.api.options.lsqml.LSQMLOptions attribute)
(ptychi.api.options.pie.PIEOptions attribute)
ObjectL1NormConstraintOptions (class in ptychi.api.options.base)
ObjectL2NormConstraintOptions (class in ptychi.api.options.base)
ObjectMultisliceRegularizationOptions (class in ptychi.api.options.base)
ObjectOptions (class in ptychi.api.options.base)
ObjectPosOriginCoordsMethods (class in ptychi.api.enums)
ObjectSmoothnessConstraintOptions (class in ptychi.api.options.base)
ObjectTotalVariationOptions (class in ptychi.api.options.base)
opr_mode_weight_options (ptychi.api.options.ad_ptychography.AutodiffPtychographyOptions attribute)
(ptychi.api.options.dm.DMOptions attribute)
(ptychi.api.options.lsqml.LSQMLOptions attribute)
(ptychi.api.options.pie.PIEOptions attribute)
OPRModeWeightsOptions (class in ptychi.api.options.base)
OPRModeWeightsSmoothingOptions (class in ptychi.api.options.base)
OPRWeightSmoothingMethods (class in ptychi.api.enums)
optimal_step_size_scaler (ptychi.api.options.lsqml.LSQMLObjectOptions attribute)
(ptychi.api.options.lsqml.LSQMLProbeOptions attribute)
optimizable (ptychi.api.options.base.OPRModeWeightsOptions attribute)
(ptychi.api.options.base.ProbePositionOptions attribute)
(ptychi.api.options.base.SliceSpacingOptions attribute)
optimization_plan (ptychi.api.options.base.FeatureOptions attribute)
(ptychi.api.options.base.ObjectL1NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectL2NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
(ptychi.api.options.base.ObjectSmoothnessConstraintOptions attribute)
(ptychi.api.options.base.ObjectTotalVariationOptions attribute)
(ptychi.api.options.base.OPRModeWeightsSmoothingOptions attribute)
(ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
(ptychi.api.options.base.ProbeCenterConstraintOptions attribute)
(ptychi.api.options.base.ProbeOrthogonalizeIncoherentModesOptions attribute)
(ptychi.api.options.base.ProbeOrthogonalizeOPRModesOptions attribute)
(ptychi.api.options.base.ProbePowerConstraintOptions attribute)
(ptychi.api.options.base.ProbeSupportConstraintOptions attribute)
(ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
(ptychi.api.options.base.RemoveObjectProbeAmbiguityOptions attribute)
(ptychi.api.options.base.SliceSpacingOptions attribute)
optimize_eigenmode_weights (ptychi.api.options.base.OPRModeWeightsOptions attribute)
optimize_intensity_variation (ptychi.api.options.base.OPRModeWeightsOptions attribute)
optimizer (ptychi.api.options.base.SliceSpacingOptions attribute)
Optimizers (class in ptychi.api.enums)
Options (class in ptychi.api.options.base)
OrthogonalizationMethods (class in ptychi.api.enums)
orthogonalize_incoherent_modes (ptychi.api.options.base.ProbeOptions attribute)
orthogonalize_initial_probe() (in module ptychi.utils)
orthogonalize_opr_modes (ptychi.api.options.base.ProbeOptions attribute)
override_update_flexibility (ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
P
pad_for_shift (ptychi.api.options.base.ForwardModelOptions attribute)
patch_interpolation_method (ptychi.api.options.base.ObjectOptions attribute)
PatchInterpolationMethods (class in ptychi.api.enums)
period_x_m (ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
period_y_m (ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
PHASE (ptychi.api.enums.MagPhaseComponents attribute)
PIE (ptychi.api.enums.Reconstructors attribute)
PIEObjectOptions (class in ptychi.api.options.pie)
PIEOPRModeWeightsOptions (class in ptychi.api.options.pie)
PIEOptions (class in ptychi.api.options.pie)
PIEProbeOptions (class in ptychi.api.options.pie)
PIEProbePositionOptions (class in ptychi.api.options.pie)
PIEReconstructorOptions (class in ptychi.api.options.pie)
pixel_size_aspect_ratio (ptychi.api.options.base.ObjectOptions attribute)
pixel_size_m (ptychi.api.options.base.ObjectOptions attribute)
PLANAR_PTYCHOGRAPHY (ptychi.api.enums.ForwardModels attribute)
POISSON (ptychi.api.enums.LossFunctions attribute)
(ptychi.api.enums.NoiseModels attribute)
POLYNOMIAL (ptychi.api.enums.OPRWeightSmoothingMethods attribute)
polynomial_degree (ptychi.api.options.base.OPRModeWeightsSmoothingOptions attribute)
position_origin_coords (ptychi.api.options.base.ObjectOptions attribute)
position_weight_update_interval (ptychi.api.options.base.PositionAffineTransformConstraintOptions attribute)
position_x_px (ptychi.api.options.base.ProbePositionOptions attribute)
position_y_px (ptychi.api.options.base.ProbePositionOptions attribute)
PositionAffineTransformConstraintOptions (class in ptychi.api.options.base)
PositionCorrectionOptions (class in ptychi.api.options.base)
PositionCorrectionTypes (class in ptychi.api.enums)
POSITIONS (ptychi.api.enums.ObjectPosOriginCoordsMethods attribute)
power_constraint (ptychi.api.options.base.ProbeOptions attribute)
preconditioning_damping_factor (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
probe_options (ptychi.api.options.ad_ptychography.AutodiffPtychographyOptions attribute)
(ptychi.api.options.dm.DMOptions attribute)
(ptychi.api.options.lsqml.LSQMLOptions attribute)
(ptychi.api.options.pie.PIEOptions attribute)
probe_position_options (ptychi.api.options.ad_ptychography.AutodiffPtychographyOptions attribute)
(ptychi.api.options.dm.DMOptions attribute)
(ptychi.api.options.lsqml.LSQMLOptions attribute)
(ptychi.api.options.pie.PIEOptions attribute)
probe_power (ptychi.api.options.base.ProbePowerConstraintOptions attribute)
probe_sparse_code (ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
probe_sparse_code_nnz (ptychi.api.options.base.SynthesisDictLearnProbeOptions attribute)
ProbeCenterConstraintOptions (class in ptychi.api.options.base)
ProbeOptions (class in ptychi.api.options.base)
ProbeOrthogonalizeIncoherentModesOptions (class in ptychi.api.options.base)
ProbeOrthogonalizeOPRModesOptions (class in ptychi.api.options.base)
ProbePositionOptions (class in ptychi.api.options.base)
ProbePowerConstraintOptions (class in ptychi.api.options.base)
ProbeSupportConstraintOptions (class in ptychi.api.options.base)
ProbeSupportMethods (class in ptychi.api.enums)
ptychi.api.enums
module
ptychi.utils
module
PtychographyDataOptions (class in ptychi.api.options.data)
PtychographyTask (class in ptychi.api.task)
R
RADAM (ptychi.api.enums.Optimizers attribute)
RANDOM (ptychi.api.enums.BatchingModes attribute)
reconstructor_options (ptychi.api.options.ad_ptychography.AutodiffPtychographyOptions attribute)
(ptychi.api.options.dm.DMOptions attribute)
(ptychi.api.options.lsqml.LSQMLOptions attribute)
(ptychi.api.options.pie.PIEOptions attribute)
Reconstructors (class in ptychi.api.enums)
RECTANGLE (ptychi.api.enums.ProbeSupportMethods attribute)
remove_grid_artifacts (ptychi.api.options.base.ObjectOptions attribute)
remove_object_probe_ambiguity (ptychi.api.options.base.ObjectOptions attribute)
RemoveGridArtifactsOptions (class in ptychi.api.options.base)
RemoveObjectProbeAmbiguityOptions (class in ptychi.api.options.base)
rescale_probe() (in module ptychi.utils)
rescale_probe_intensity_in_first_epoch (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
resolve_type() (ptychi.api.options.base.Options method)
RMSPROP (ptychi.api.enums.Optimizers attribute)
ROTATION (ptychi.api.enums.AffineDegreesOfFreedom attribute)
RPIE (ptychi.api.enums.Reconstructors attribute)
run() (ptychi.api.task.PtychographyTask method)
S
save_data_on_device (ptychi.api.options.data.PtychographyDataOptions attribute)
SCALE (ptychi.api.enums.AffineDegreesOfFreedom attribute)
scale_object (ptychi.api.options.base.ProbePowerConstraintOptions attribute)
set_default_complex_dtype() (in module ptychi.utils)
set_large_tensor_device() (ptychi.api.task.PtychographyTask method)
SGD (ptychi.api.enums.Optimizers attribute)
SHEAR (ptychi.api.enums.AffineDegreesOfFreedom attribute)
single_slice_solve_obj_prb_step_size_jointly (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
slice_for_correction (ptychi.api.options.base.PositionCorrectionOptions attribute)
slice_spacing_options (ptychi.api.options.base.ObjectOptions attribute)
slice_spacings_m (ptychi.api.options.base.ObjectOptions attribute)
SliceSpacingOptions (class in ptychi.api.options.base)
smoothing (ptychi.api.options.base.OPRModeWeightsOptions attribute)
smoothness_constraint (ptychi.api.options.base.ObjectOptions attribute)
solve_step_sizes_only_using_first_probe_mode (ptychi.api.options.lsqml.LSQMLReconstructorOptions attribute)
sort_by_occupancy (ptychi.api.options.base.ProbeOrthogonalizeIncoherentModesOptions attribute)
SPARSE_ADAM (ptychi.api.enums.Optimizers attribute)
SPECIFIED (ptychi.api.enums.ObjectPosOriginCoordsMethods attribute)
step_size (ptychi.api.options.base.ProbePositionOptions attribute)
(ptychi.api.options.base.SliceSpacingOptions attribute)
SUPPORT (ptychi.api.enums.ObjectPosOriginCoordsMethods attribute)
support_constraint (ptychi.api.options.base.ProbeOptions attribute)
SVD (ptychi.api.enums.OrthogonalizationMethods attribute)
SynthesisDictLearnProbeOptions (class in ptychi.api.options.base)
T
TaskOptions (class in ptychi.api.options.base)
threshold (ptychi.api.options.base.ProbeSupportConstraintOptions attribute)
to_numpy() (in module ptychi.utils)
to_tensor() (in module ptychi.utils)
total_variation (ptychi.api.options.base.ObjectOptions attribute)
TRANSLATION (ptychi.api.enums.AffineDegreesOfFreedom attribute)
U
UNET (ptychi.api.enums.DIPModels attribute)
UNIFORM (ptychi.api.enums.BatchingModes attribute)
unwrap_image_grad_method (ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
unwrap_image_integration_method (ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
unwrap_phase (ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
update_magnitude_limit (ptychi.api.options.base.PositionCorrectionOptions attribute)
update_relaxation (ptychi.api.options.base.OPRModeWeightsOptions attribute)
use_intensity_for_com (ptychi.api.options.base.ProbeCenterConstraintOptions attribute)
use_total_intensity_for_com (ptychi.api.options.base.ProbeCenterConstraintOptions attribute)
V
valid_pixel_mask (ptychi.api.options.data.PtychographyDataOptions attribute)
W
wavelength_m (ptychi.api.options.data.PtychographyDataOptions attribute)
weight (ptychi.api.options.base.ObjectL1NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectL2NormConstraintOptions attribute)
(ptychi.api.options.base.ObjectMultisliceRegularizationOptions attribute)
(ptychi.api.options.base.ObjectTotalVariationOptions attribute)
window_size (ptychi.api.options.base.RemoveGridArtifactsOptions attribute)
X
X (ptychi.api.enums.Directions attribute)
XY (ptychi.api.enums.Directions attribute)
Y
Y (ptychi.api.enums.Directions attribute)